In this paper, we investigate that the effects of weather, turbulence and pointing errors on laser beams, and establish a joint channel statistical model, then derive the performance parameters of free space optical communication system based on OOK modulation, such as average bit error rate, average channel capacity and outage probability, and finally derive their new expressions by using Meijer’s G function and H function. For an atmospheric laser communication system with a wavelength of 1550 nm and a link length of 1 km, the performance parameters of the system are simulated and analyzed. The results show that when the standard deviation of jitter is small, the communication system is obviously affected by turbulence, and the performance of communication system with different turbulence can be significantly improved by the aperture average effect; aperture averaging can also significantly compensate for the deterioration of the communication system performance due to the decrease of atmospheric visibility; when the standard deviation of jitter is large, the system performance is limited by the average aperture effect.
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