Image Processing

Impact of family structure and common environment on heritability estimation for neuroimaging genetics studies using Sequential Oligogenic Linkage Analysis Routines

[+] Author Affiliations
Mary Ellen Koran

Vanderbilt University, Molecular Physiology and Biophysics, Nashville, Tennessee

Vanderbilt University, Medical Scientist Training Program, Nashville, Tennessee

Tricia A. Thornton-Wells

Vanderbilt University, Molecular Physiology and Biophysics, Nashville, Tennessee

Neda Jahanshad, Paul M. Thompson

University of Southern California, Institute of Neuroimaging and Informatics, Imaging Genetics Center, Los Angeles, California

David C. Glahn

Yale University, Psychiatry, New Haven, Connecticut

John Blangero

Texas Biomedical Research Institute, Department of Genetics, P.O. Box 760549, San Antonio, Texas

Thomas E. Nichols

University of Warwick, Department of Statistics, Coventry, United Kingdom

Peter Kochunov

University of Maryland, Maryland Psychiatric Research Center, Baltimore, Maryland

Bennett A. Landman

Vanderbilt University, Department of Electrical Engineering, Nashville, Tennessee

J. Med. Imag. 1(1), 014005 (Jun 27, 2014). doi:10.1117/1.JMI.1.1.014005
History: Received March 5, 2014; Revised May 30, 2014; Accepted June 2, 2014
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Abstract.  Imaging genetics is an emerging methodological field that combines genetic information with medical imaging-derived metrics to understand how genetic factors impact observable phenotypes. In order for a trait to be a reasonable phenotype in an imaging genetics study, it must be heritable: at least some proportion of its variance must be due to genetic influences. The Sequential Oligogenic Linkage Analysis Routines (SOLAR) imaging genetics software can estimate the heritability of a trait in complex pedigrees. We investigate the ability of SOLAR to accurately estimate heritability and common environmental effects on simulated imaging phenotypes in various family structures. We found that heritability is reliably estimated with small family-based studies of 40 to 80 individuals, though subtle differences remain between the family structures. In an imaging application analysis, we found that with 80 subjects in any of the family structures, estimated heritability of white matter fractional anisotropy was biased by <10% for every region of interest. Results from these studies can be used when investigators are evaluating power in planning genetic analyzes.

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Citation

Mary Ellen Koran ; Tricia A. Thornton-Wells ; Neda Jahanshad ; David C. Glahn ; Paul M. Thompson, et al.
"Impact of family structure and common environment on heritability estimation for neuroimaging genetics studies using Sequential Oligogenic Linkage Analysis Routines", J. Med. Imag. 1(1), 014005 (Jun 27, 2014). ; http://dx.doi.org/10.1117/1.JMI.1.1.014005


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